ProtocolExecution

https://openminds.ebrains.eu/core/ProtocolExecution

part of core in version v0 - view as JSON Schema

Required properties are highlighted in bold

property		value
name*	description	type	instruction
input	Something or someone that is put into or participates in a process or machine.	linked object array (1 - n) of type: FileBundle OR FileInstance OR SubjectGroupState OR SubjectState OR TissueSampleCollectionState OR TissueSampleState	Add all inputs (subject state, tissue sample state, file instance or file bundle) used by this protocol execution.
output	Something or someone that comes out of, is delivered or produced by a process or machine.	linked object array (1 - n) of type: FileBundle OR FileInstance OR SubjectGroupState OR SubjectState OR TissueSampleCollectionState OR TissueSampleState	Add all outputs (subject state, tissue sample state, file instance or file bundle) generated by this protocol execution.
protocol	Plan that describes the process of a scientific or medical experiment, treatment, or procedure.	linked object Protocol	Add the protocol of this protocol execution.
description	Longer statement or account giving the characteristics of someone or something.	string	Enter a description of this protocol execution.
parameterSetting		linked object array (1 - n) of type: ParameterSetting	Add all important parameter settings defining this protocol execution.
preparationType	Distinct class of actions or processes that make something ready for use or service.	linked object PreparationType	Add the initial preparation type for this protocol execution.
semanticallyAnchoredTo	Reference to a related anatomical structure without providing a quantitative proof of the claimed relation.	linked object array (1 - n) of type: AnatomicalEntity	Add all anatomical entities to which the outputs of this protocol execution can be semantically anchored to.
studyTarget	Structure or function that was targeted within a study.	linked object array (1 - n) of type: BiologicalSex OR Disease OR Genotype OR Phenotype OR Species OR TermSuggestion OR AnatomicalEntity	Add all study targets of this model version.

*This is the simplified property name - within a metadata instance of this schema (JSON-LD) the properties are extended to map to the openMINDS vocabulary namespace ("https://openminds.ebrains.eu/vocab/PROPERTY_NAME").