TissueSampleAttribute

https://openminds.ebrains.eu/controlledTerms/TissueSampleAttribute

part of controlledTerms in version v1 - view as JSON Schema

Required properties are highlighted in bold
propertyvalue
name*descriptiontypeinstruction
name Word or phrase that constitutes the distinctive designation of a being or thing. string Controlled term originating from a defined terminology.
definition Short, but precise statement of the meaning of a word, word group, sign or a symbol. string Enter one sentence for defining this term.
description Longer statement or account giving the characteristics of someone or something. string Enter a short text describing this term.
interlexIdentifier Persistent identifier for a term registered in the InterLex project. string (format: iri) Enter the internationalized resource identifier (IRI) pointing to the integrated ontology entry in the InterLex project.
knowledgeSpaceLink Persistent link to an encyclopedia entry in the Knowledge Space project. string (format: iri) Enter the internationalized resource identifier (IRI) pointing to the wiki page of the corresponding term in the KnowledgeSpace.
preferredOntologyIdentifier Persistent identifier of a preferred ontological term. string (format: iri) Enter the internationalized resource identifier (IRI) pointing to the preferred ontological term.
synonym Words or expressions used in the same language that have the same or nearly the same meaning in some or all senses. array (1 - n) of type:
string		 Enter one or several synonyms (including abbreviations) for this controlled term.
*This is the simplified property name - within a metadata instance of this schema (JSON-LD) the properties are extended to map to the openMINDS vocabulary namespace ("https://openminds.ebrains.eu/vocab/PROPERTY_NAME").
instances
nameID
fixated A specimen that was treated with a fixative (e.g., paraformaldehyde) to preserve its existing form and structure. https://openminds.ebrains.eu/instances/tissueSampleAttribute/fixated JSON-LD
free floating A specimen that has been suspended in solution for further handling or experimental steps (e.g., immunohistochemical staining), or temporary storage before further use. https://openminds.ebrains.eu/instances/tissueSampleAttribute/freeFloating JSON-LD
healthy A 'healthy tissue sample' shows no significant pathological abnormalities. What passes as not-significant pathological abnormality is defined by the experimental study the tissue sample is used in. https://openminds.ebrains.eu/instances/tissueSampleAttribute/healthy JSON-LD
labeled A specimen that has been modified using chemical or biochemical substances for selective tagging of e.g., molecules or subcellular components, which does not necessarily leads to a visual observable colorization. https://openminds.ebrains.eu/instances/tissueSampleAttribute/labeled JSON-LD
mounted A specimen that has been put ('mounted') on e.g., a glass slide with mounting medium in order to be supported for further handling and/or long term preservation. https://openminds.ebrains.eu/instances/tissueSampleAttribute/mounted JSON-LD
stained A specimen that has been dyed using chemical or biochemical substances for general colorization of e.g., molecules or subcellular components, that can be visualized under the right light exposure. https://openminds.ebrains.eu/instances/tissueSampleAttribute/stained JSON-LD
unstained A specimen that was not artificially modified in colorization using chemical or biochemical substances. https://openminds.ebrains.eu/instances/tissueSampleAttribute/unstained JSON-LD
untreated A specimen that has not been modified or treated (e.g., with chemicals) compared to its natural state. https://openminds.ebrains.eu/instances/tissueSampleAttribute/untreated JSON-LD